Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus
Accession NumberLKTV00000000.1
Gene Summary
Adenine Count
1463582 bp
Thymine Count
1462263 bp
Guanine Count
3285656 bp
Cytosine Count
3276497 bp
Genome Length
9487998 bp
Protein-coding Genes
8343 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gcn5 family acetyltransferase | APR51_04380 | Not Available | + | 932709 - 933407 | 24852.0 |
| short-chain dehydrogenase | APR51_04385 | Not Available | + | 933441 - 934157 | 24972.2 |
| exodeoxyribonuclease iii | APR51_04390 | Not Available | + | 934225 - 935016 | 29341.0 |
| hypothetical protein | APR51_04395 | Not Available | + | 935092 - 935688 | 21437.8 |
| nmra family protein | APR51_04400 | Q5ZID0 | + | 935818 - 936903 | 40669.2 |
| gcn5 family acetyltransferase | APR51_04405 | Not Available | + | 936978 - 937484 | 17870.5 |
| molybdenum cofactor guanylyltransferase | APR51_04410 | A9IFD9 | - | 937541 - 938140 | 21380.5 |
| nadph-dependent fmn reductase | APR51_04415 | Not Available | - | 938162 - 938731 | 20435.6 |
| hypothetical protein | APR51_04420 | Not Available | - | 938746 - 939717 | 34358.2 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | APR51_04425 | Q2KIB0 | - | 939736 - 940593 | 30864.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.