Pseudomonas viridiflava str. ICMP 8820

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas viridiflava
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatepilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack
Biotic relationshipFree-living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas viridiflava str. ICMP 8820

Accession NumberLKCA00000000.1

Gene Summary

Adenine Count

1187376 bp

Thymine Count

1184864 bp

Guanine Count

1716189 bp

Cytosine Count

1721239 bp

Genome Length

5809703 bp

Protein-coding Genes

5002 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dna ligase-associated dexh box helicaseAO275_16220Not Available+141210 - 14369992217.0
dead/deah box helicaseAO275_16225Not Available+143696 - 14435224258.2
hypothetical proteinAO275_16230Not Available-144417 - 1446297364.65
deoxycytidine triphosphate deaminaseAO275_16235Not Available-144742 - 14530821295.4
cold-shock proteinAO275_16240Not Available+145628 - 1458377727.11
atp-binding proteinAO275_16245Not Available-145971 - 14706538639.8
methionine--trna ligaseAO275_16250Not Available+147241 - 14928375351.8
(4fe-4s)-binding proteinAO275_16255Not Available+149397 - 15043736877.4
endonuclease iiiAO275_16260Not Available+150543 - 15118123915.0
leucyl-trna synthetaseAO275_16265Not Available+151287 - 1514696895.93

Displaying genes 221 – 230 of 5139 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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