Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava str. ICMP 8820
Accession NumberLKCA00000000.1
Gene Summary
Adenine Count
1187376 bp
Thymine Count
1184864 bp
Guanine Count
1716189 bp
Cytosine Count
1721239 bp
Genome Length
5809703 bp
Protein-coding Genes
5002 genes
Non-Coding Genes
137 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AO275_08230 | Not Available | + | 5372047 - 5373612 | 57019.5 |
| hypothetical protein | AO275_08235 | Not Available | + | 5373685 - 5374209 | 18676.3 |
| alkylhydroperoxidase | AO275_08240 | Not Available | + | 5374206 - 5374805 | 22081.2 |
| dihydroxyacetone kinase | AO275_08245 | Not Available | - | 5374876 - 5375520 | 22412.8 |
| dihydroxyacetone kinase | AO275_08250 | Not Available | - | 5375524 - 5376525 | 35188.5 |
| iditol 2-dehydrogenase | AO275_08255 | Not Available | - | 5376566 - 5377681 | 41067.8 |
| short-chain dehydrogenase | AO275_08260 | Not Available | - | 5377709 - 5378464 | 26328.7 |
| sugar abc transporter substrate-binding protein | AO275_08265 | Not Available | - | 5378696 - 5379706 | 36062.1 |
| sugar abc transporter permease | AO275_08270 | Not Available | - | 5379759 - 5380736 | 34085.7 |
| d-ribose transporter atp-binding protein | AO275_08275 | Not Available | - | 5380733 - 5382220 | 53605.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
