Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava str. CFBP13515
Accession NumberQGAG00000000.1
Gene Summary
Adenine Count
1187560 bp
Thymine Count
1202732 bp
Guanine Count
1744177 bp
Cytosine Count
1734867 bp
Genome Length
5869336 bp
Protein-coding Genes
5118 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(967)-c(5))-methyltransferase | PviCFBP13515_03180 | Not Available | - | 699955 - 701265 | 47465.3 |
| methionyl-trna formyltransferase | PviCFBP13515_03185 | Not Available | - | 701262 - 702206 | 33465.6 |
| peptide deformylase | PviCFBP13515_03190 | Not Available | - | 702270 - 702776 | 19197.2 |
| peptidoglycan-binding protein | PviCFBP13515_03195 | Not Available | + | 702900 - 703925 | 37536.9 |
| dna-protecting protein dpra | PviCFBP13515_03200 | Not Available | + | 704049 - 705161 | 38746.5 |
| sua5/ycio/yrdc/ywlc family protein | PviCFBP13515_03205 | Not Available | + | 705199 - 705756 | 20576.8 |
| quinone oxidoreductase | PviCFBP13515_03210 | Not Available | - | 705781 - 706758 | 34435.3 |
| oxygen-dependent coproporphyrinogen oxidase | PviCFBP13515_03215 | Not Available | + | 706927 - 707841 | 34618.4 |
| shikimate dehydrogenase | PviCFBP13515_03220 | Not Available | + | 708083 - 708904 | 29356.9 |
| sulp family inorganic anion transporter | PviCFBP13515_03225 | Not Available | - | 708935 - 710503 | 56409.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
