Pseudomonas viridiflava str. CFBP13515

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas viridiflava
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatepilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack
Biotic relationshipFree-living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas viridiflava str. CFBP13515

Accession NumberQGAG00000000.1

Gene Summary

Adenine Count

1187560 bp

Thymine Count

1202732 bp

Guanine Count

1744177 bp

Cytosine Count

1734867 bp

Genome Length

5869336 bp

Protein-coding Genes

5118 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf4124 domain-containing proteinPviCFBP13515_24410Not Available-5371438 - 537206122866.8
duf4124 domain-containing proteinPviCFBP13515_24415Not Available-5372058 - 537259719797.7
chorismate mutasePviCFBP13515_24420Not Available-5372667 - 537322420392.7
glutamate--ammonia ligasePviCFBP13515_24425Not Available-5373409 - 537481551783.4
trna 4-thiouridine(8) synthase thiiPviCFBP13515_24435Not Available+5375150 - 537660454342.1
translational gtpase typaPviCFBP13515_24440Not Available+5376748 - 537856867079.6
duf3100 domain-containing proteinPviCFBP13515_24445Not Available-5379032 - 538036046317.9
duf1338 domain-containing proteinPviCFBP13515_24455Not Available-5380870 - 538225251385.9
aspartate aminotransferase family proteinPviCFBP13515_24460Not Available-5382298 - 538354544507.8
aldehyde dehydrogenase family proteinPviCFBP13515_24465Not Available+5383793 - 538528353354.6

Displaying genes 4781 – 4790 of 5199 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–2 of 2 metabolites