Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava
Accession NumberRBRK00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP40_02515 | Not Available | + | 956339 - 956959 | 22329.7 |
| hypothetical protein | ALP40_02516 | Not Available | + | 957052 - 957294 | 9309.14 |
| pca operon transcriptional activator pcaq | ALP40_02517 | Not Available | + | 957344 - 958273 | 33831.2 |
| protocatechuate 3,4-dioxygenase subunit beta | ALP40_02518 | Not Available | + | 958369 - 959127 | 28122.6 |
| protocatechuate 3,4-dioxygenase subunit alpha | ALP40_02519 | Not Available | + | 959139 - 959741 | 22228.2 |
| 4-hydroxybenzoate transporter | ALP40_02520 | Not Available | + | 959822 - 961171 | 47333.1 |
| 3-carboxy-cis,cis-muconate cycloisomerase | ALP40_02521 | Not Available | + | 961196 - 962557 | 49007.1 |
| 4-carboxymuconolactone decarboxylase | ALP40_02522 | Not Available | + | 962554 - 962952 | 15048.1 |
| outer membrane porin, oprd protein | ALP40_04982 | Not Available | - | 963018 - 964274 | 46139.9 |
| hypothetical protein | ALP40_02524 | Not Available | + | 964522 - 965409 | 31991.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
