Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidase | PviCFBP13507_20120 | Not Available | + | 4455161 - 4456612 | 51475.4 |
| hypothetical protein | PviCFBP13507_20125 | Not Available | - | 4456632 - 4457018 | 14367.1 |
| duf2934 domain-containing protein | PviCFBP13507_20130 | Not Available | + | 4457426 - 4457623 | 7421.36 |
| hypothetical protein | PviCFBP13507_20135 | Not Available | - | 4457620 - 4457835 | 7928.69 |
| ferritin-like domain-containing protein | PviCFBP13507_20140 | Not Available | - | 4457838 - 4458563 | 26403.8 |
| hypothetical protein | PviCFBP13507_20145 | Not Available | - | 4458583 - 4459749 | 44197.9 |
| histidine kinase | PviCFBP13507_20150 | Not Available | - | 4459909 - 4462107 | 82224.4 |
| duf2934 domain-containing protein | PviCFBP13507_20155 | Not Available | - | 4462489 - 4462728 | 8745.18 |
| cytochrome o ubiquinol oxidase subunit iv | PviCFBP13507_20160 | Not Available | - | 4462944 - 4463282 | 12680.2 |
| cytochrome o ubiquinol oxidase subunit iii | PviCFBP13507_20165 | Not Available | - | 4463284 - 4463898 | 22835.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
