Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated translation inhibitor raia | PviCFBP13507_06320 | Not Available | - | 1402375 - 1402683 | 11623.2 |
| rna polymerase factor sigma-54 | PviCFBP13507_06325 | Not Available | - | 1402758 - 1404251 | 56715.1 |
| lps export abc transporter atp-binding protein | PviCFBP13507_06330 | Not Available | - | 1404447 - 1405172 | 26513.2 |
| lipopolysaccharide transport periplasmic protein lpta | PviCFBP13507_06335 | Not Available | - | 1405172 - 1405720 | 19746.6 |
| lps export abc transporter periplasmic protein lptc | PviCFBP13507_06340 | Not Available | - | 1405707 - 1406279 | 21506.6 |
| phenylphosphate carboxylase subunit delta | PviCFBP13507_06345 | Not Available | - | 1406289 - 1406798 | 18298.1 |
| kpsf/gutq family sugar-phosphate isomerase | PviCFBP13507_06350 | Not Available | - | 1406829 - 1407803 | 34641.2 |
| phospholipid abc transporter atp-binding protein mlaf | PviCFBP13507_06355 | Not Available | + | 1408129 - 1408938 | 29533.9 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | PviCFBP13507_06360 | Not Available | + | 1408938 - 1409735 | 28325.2 |
| outer membrane lipid asymmetry maintenance protein mlad | PviCFBP13507_06365 | Not Available | + | 1409735 - 1410202 | 16390.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
