Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis macrogoltabida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingopyxis macrogoltabida str. EY-1
Accession NumberNZ_CP012702.1
Gene Summary
Adenine Count
11389 bp
Thymine Count
11780 bp
Guanine Count
17742 bp
Cytosine Count
17981 bp
Genome Length
58892 bp
Protein-coding Genes
72 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AN936_RS23425 | Not Available | - | 49340 - 49645 | 11246.8 |
| type iv secretion system protein | AN936_RS23430 | Not Available | - | 49648 - 50361 | 25560.2 |
| virb4 family type iv secretion/conjugal transfer atpase | AN936_RS23435 | Q9R2W4 | - | 50375 - 52759 | 89883.6 |
| type iv secretion system protein virb3 | AN936_RS23440 | Q9S3N1 | - | 52746 - 53090 | 12305.2 |
| trbc/virb2 family protein | AN936_RS23445 | Not Available | - | 53097 - 53438 | 12135.5 |
| lytic transglycosylase domain-containing protein | AN936_RS23450 | P17791 | - | 53460 - 54125 | 23252.5 |
| is6-like element is6100 family transposase | AN936_RS23455 | P0C1L0 | + | 54445 - 55209 | 29684.0 |
| lpd7 domain-containing protein | AN936_RS23460 | Not Available | + | 55276 - 56460 | 43997.3 |
| hypothetical protein | AN936_RS23465 | Not Available | + | 56500 - 56949 | 16743.4 |
| hypothetical protein | AN936_RS23470 | Not Available | + | 57009 - 57239 | 8328.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.