Janthinobacterium lividum str. UCD_MED1

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Janthinobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusJanthinobacterium
SpeciesJanthinobacterium lividum
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Janthinobacterium lividum str. UCD_MED1

Accession NumberVDGE00000000.1

Gene Summary

Adenine Count

1188835 bp

Thymine Count

1181209 bp

Guanine Count

1999900 bp

Cytosine Count

2012680 bp

Genome Length

6382737 bp

Protein-coding Genes

5473 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
putative toxin-antitoxin system toxin component, pin familyFHI69_03970Not Available+875666 - 87610015774.4
pyridoxal phosphate-dependent aminotransferaseFHI69_03975Not Available+876183 - 87736142507.1
hd domain-containing proteinFHI69_03980Not Available+877410 - 87851340519.6
nuclear transport factor 2 family proteinFHI69_03985Not Available-878557 - 87905117894.5
beta-lactamase family proteinFHI69_03990Not Available-879475 - 88057240754.6
alpha/beta hydrolaseFHI69_03995Not Available-880668 - 88158534349.1
tetratricopeptide repeat proteinFHI69_04000Not Available-881596 - 88266638204.1
aaa family atpaseFHI69_04005Not Available-882684 - 88358633175.5
pilus (msha type) biogenesis protein mshlFHI69_04010Not Available-883587 - 88537762678.2
msha biogenesis protein mshkFHI69_04015Not Available-885416 - 88581714034.8

Displaying genes 841 – 850 of 5630 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites