Janthinobacterium lividum str. UCD_MED1

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Janthinobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusJanthinobacterium
SpeciesJanthinobacterium lividum
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Janthinobacterium lividum str. UCD_MED1

Accession NumberVDGE00000000.1

Gene Summary

Adenine Count

1188835 bp

Thymine Count

1181209 bp

Guanine Count

1999900 bp

Cytosine Count

2012680 bp

Genome Length

6382737 bp

Protein-coding Genes

5473 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
p-type conjugative transfer atpase trbbFHI69_02600Not Available+586999 - 58795834539.8
conjugal transfer protein trbcFHI69_02605Not Available+588002 - 58839713642.1
conjugal transfer protein trbdFHI69_02610Not Available+588400 - 58871111899.7
virb4 family type iv secretion/conjugal transfer atpaseFHI69_02615Not Available+588708 - 59124592741.8
conjugal transfer protein trbfFHI69_02620Not Available+591242 - 59200627756.9
p-type conjugative transfer protein trbgFHI69_02625Not Available+592042 - 59291731906.1
conjugal transfer protein trbhFHI69_02630Not Available+592919 - 59341017199.8
trbi/virb10 family proteinFHI69_02635Not Available+593407 - 59475948139.0
p-type conjugative transfer protein trbjFHI69_02640Not Available+594778 - 59553928036.4
entry exclusion lipoprotein trbkFHI69_02645Not Available+595550 - 5957597707.34

Displaying genes 611 – 620 of 5630 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites