Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas circumdentaria |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | oral cavity |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Porphyromonas circumdentaria
Accession NumberFUXE00000000.1
Gene Summary
Adenine Count
583172 bp
Thymine Count
573286 bp
Guanine Count
433714 bp
Cytosine Count
440372 bp
Genome Length
2033794 bp
Protein-coding Genes
1691 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN02745171_00493 | Not Available | + | 579724 - 581010 | 47161.6 |
| hypothetical protein | SAMN02745171_00494 | Not Available | - | 581301 - 581717 | 15287.2 |
| hypothetical protein | SAMN02745171_00495 | Not Available | + | 582160 - 583905 | 65286.2 |
| formate/nitrite transporter | SAMN02745171_00496 | Not Available | + | 584194 - 584976 | 28275.5 |
| hypothetical protein | SAMN02745171_00497 | Not Available | + | 585224 - 585397 | 6331.39 |
| hypothetical protein | SAMN02745171_00498 | Not Available | + | 585589 - 586353 | 29303.2 |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN02745171_00499 | Not Available | + | 587035 - 587946 | 32890.0 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN02745171_00500 | Not Available | + | 587949 - 588653 | 26755.2 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN02745171_00501 | Not Available | + | 588656 - 589363 | 25818.4 |
| 16s rrna c967 or c1407 c5-methylase, rsmb/rsmf family | SAMN02745171_00502 | Not Available | + | 589360 - 590775 | 53043.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
