Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis
Accession NumberPSXW00000000.1
Gene Summary
Adenine Count
624236 bp
Thymine Count
620791 bp
Guanine Count
1225686 bp
Cytosine Count
1223693 bp
Genome Length
3694510 bp
Protein-coding Genes
3478 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | C5E16_13330 | Not Available | - | 2770369 - 2771373 | 36138.4 |
| cytochrome ubiquinol oxidase subunit i | C5E16_13335 | Not Available | - | 2771376 - 2772788 | 52426.1 |
| hypothetical protein | C5E16_13340 | Not Available | + | 2773216 - 2773707 | 15876.4 |
| gnat family n-acetyltransferase | C5E16_13345 | Not Available | - | 2774044 - 2774568 | 19244.8 |
| gnat family n-acetyltransferase | C5E16_13350 | Not Available | + | 2774626 - 2775096 | 16785.8 |
| 1,4-dihydroxy-2-naphthoate prenyltransferase | C5E16_13355 | Not Available | + | 2775093 - 2775938 | 28069.8 |
| fad-dependent monooxygenase | C5E16_13360 | Not Available | - | 2775931 - 2777121 | 41477.0 |
| methyltransferase | C5E16_13365 | Not Available | - | 2777118 - 2777822 | 25217.1 |
| type iii polyketide synthase | C5E16_13370 | Not Available | - | 2777822 - 2779063 | 42754.0 |
| duf3618 domain-containing protein | C5E16_13375 | Not Available | - | 2779060 - 2779551 | 17356.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.