Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis
Accession NumberPSXW00000000.1
Gene Summary
Adenine Count
624236 bp
Thymine Count
620791 bp
Guanine Count
1225686 bp
Cytosine Count
1223693 bp
Genome Length
3694510 bp
Protein-coding Genes
3478 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | C5E16_13125 | Not Available | - | 2722587 - 2723591 | 34130.7 |
| succinyl-diaminopimelate desuccinylase | C5E16_13130 | Not Available | + | 2723671 - 2724768 | 39069.0 |
| hypothetical protein | C5E16_13135 | Not Available | + | 2724750 - 2725982 | 44314.8 |
| duf3117 domain-containing protein | C5E16_13140 | Not Available | + | 2726129 - 2726302 | 5886.18 |
| o-methyltransferase | C5E16_13145 | Not Available | - | 2726450 - 2727082 | 22173.4 |
| sec-independent protein translocase tatb | C5E16_13150 | Not Available | + | 2727234 - 2727608 | 14211.3 |
| lysr family transcriptional regulator | C5E16_13155 | Not Available | - | 2727723 - 2728640 | 32460.2 |
| sodium:proton antiporter | C5E16_13160 | Not Available | - | 2728975 - 2730150 | 40107.6 |
| duf1003 domain-containing protein | C5E16_13165 | Not Available | - | 2730140 - 2730691 | 20869.8 |
| cbs domain-containing protein | C5E16_13170 | Not Available | - | 2730675 - 2732021 | 48833.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.