Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | eggplant |
Genome Summary
Clavibacter michiganensis
Accession NumberPSXW00000000.1
Gene Summary
Adenine Count
624236 bp
Thymine Count
620791 bp
Guanine Count
1225686 bp
Cytosine Count
1223693 bp
Genome Length
3694510 bp
Protein-coding Genes
3478 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | C5E11_01255 | Not Available | - | 287502 - 289025 | 54971.1 |
| hypothetical protein | C5E11_01260 | Not Available | + | 289009 - 289326 | 10947.0 |
| ferredoxin family protein | C5E11_01265 | Not Available | + | 289378 - 289707 | 11985.0 |
| succinyldiaminopimelate transaminase | C5E11_01270 | Not Available | + | 289708 - 290808 | 39254.5 |
| citrate synthase | C5E11_01275 | Not Available | + | 290980 - 292308 | 48876.1 |
| deoxyribose-phosphate aldolase | C5E11_01280 | Not Available | - | 292336 - 293037 | 23809.2 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | C5E11_01285 | Not Available | - | 293082 - 294062 | 33848.4 |
| succinyl-diaminopimelate desuccinylase | C5E11_01290 | Not Available | + | 294130 - 295266 | 39855.8 |
| hypothetical protein | C5E11_01295 | Not Available | + | 295263 - 296474 | 44663.7 |
| duf3117 domain-containing protein | C5E11_01300 | Not Available | + | 296552 - 296725 | 5894.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.