Capnocytophaga cynodegmi

Gram-negativeMotile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga cynodegmi is a gram-negative, spiral-shaped bacterium that thrives in a temperature range of 20-37°C, placing it in the mesophilic temperature preference category. As a heterotroph, it obtains its energy by breaking down complex organic molecules, specifically glucose, rather than producing its own food through photosynthesis or chemosynthesis. This bacterium produces energy through cellular respiration, utilizing the pyruvate fermentation pathway. Capnocytophaga cynodegmi is known to inhabit a wide range of body sites across various species, including the human oral cavity, gastrointestinal tract, and genitourinary tract. It is also detected in animals such as dogs, cats, and horses. This versatility suggests that the bacterium has adapted to survive in a variety of ecological niches. Oxygen preference-wise, Capnocytophaga cynodegmi is a facultative anaerobe, meaning it can thrive in the presence of oxygen but can also survive without it. This adaptability allows it to colonize and remain in environments with varying levels of oxygen availability. Further research has revealed that Capnocytophaga cynodegmi plays a crucial role in the human oral microbiome, contributing to the breakdown of complex carbohydrates and the production of volatile sulfur compounds, which are responsible for the characteristic "bad breath" odor. In addition, studies have linked the bacterium to the development of periodontal diseases, emphasizing the importance of maintaining a balanced oral ecosystem to prevent the overgrowth of opportunistic pathogens. Notably, Capnocytophaga cynodegmi has been recognized as a zoonotic agent, capable of transmitting from animals to humans. While most infections are mild and self-limiting, severe cases can lead to sepsis and even death. Despite its potential pathogenicity, this bacterium serves as a valuable model for understanding the complexities of the human microbiome and the intricate relationships between microorganisms and their hosts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga cynodegmi
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature37
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Capnocytophaga cynodegmi

Accession NumberNZ_CP022378.1

Gene Summary

Adenine Count

856364 bp

Thymine Count

879597 bp

Guanine Count

452579 bp

Cytosine Count

451935 bp

Genome Length

2640475 bp

Protein-coding Genes

2277 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
is1595 family transposaseCGC48_RS05590Not Available-1258532 - 126040270088.5
gdsl-type esterase/lipase family proteinCGC48_RS05595Not Available-1260972 - 126162225082.7
is1595 family transposaseCGC48_RS05600Not Available-1261653 - 126205615978.0
atp-binding proteinCGC48_RS05605Not Available-1262109 - 1264961109530.0
spfh domain-containing proteinCGC48_RS05610Not Available+1265572 - 126621924734.5
formylglycine-generating enzyme family proteinCGC48_RS05615Not Available+1266603 - 126751733457.5
formylglycine-generating enzyme family proteinCGC48_RS05620Not Available+1267787 - 126871334273.0
holliday junction branch migration protein ruvaCGC48_RS05625Not Available+1268957 - 126954121270.8
hypothetical proteinCGC48_RS05630Not Available+1269541 - 127096556065.0
cell surface protein spraCGC48_RS05635Not Available+1271037 - 1278041265019.0

Displaying genes 3611 – 3620 of 4824 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites