Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Rikenella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Rikenella |
| Species | Rikenella microfusus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rikenella microfusus
Accession NumberUGVL00000000.1
Gene Summary
Adenine Count
638140 bp
Thymine Count
632026 bp
Guanine Count
835063 bp
Cytosine Count
840640 bp
Genome Length
2945869 bp
Protein-coding Genes
2363 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | NCTC11190_00570 | Not Available | - | 734640 - 736796 | 79368.1 |
| uncharacterised protein | NCTC11190_00571 | Not Available | - | 737085 - 737444 | 13927.7 |
| putative alpha-1,2-mannosidase | NCTC11190_00572 | Not Available | - | 738068 - 741088 | 109916.0 |
| intracellular protease, pfpi family | NCTC11190_00573 | Not Available | - | 741443 - 741973 | 19036.0 |
| hth-type transcriptional activator hxlr | NCTC11190_00574 | Not Available | + | 742123 - 742500 | 13803.9 |
| putative alpha-1,2-mannosidase | NCTC11190_00575 | Not Available | + | 742560 - 744833 | 83166.1 |
| tryptophan--trna ligase | NCTC11190_00576 | Not Available | - | 744915 - 745904 | 36988.3 |
| outer membrane efflux protein bepc precursor | NCTC11190_00577 | Not Available | - | 746540 - 747916 | 50844.3 |
| domain of uncharacterised function (duf303) | NCTC11190_00578 | Not Available | - | 748026 - 750251 | 82985.6 |
| fucose 4-o-acetylase and related acetyltransferases | NCTC11190_00579 | Not Available | - | 750303 - 751340 | 38341.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.