Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Rikenella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Rikenella |
| Species | Rikenella microfusus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rikenella microfusus
Accession NumberUGVL00000000.1
Gene Summary
Adenine Count
638140 bp
Thymine Count
632026 bp
Guanine Count
835063 bp
Cytosine Count
840640 bp
Genome Length
2945869 bp
Protein-coding Genes
2363 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| macrolide-specific efflux protein maca precursor | NCTC11190_00510 | Not Available | + | 658881 - 660065 | 40491.6 |
| cation efflux system protein czca | NCTC11190_00511 | Not Available | + | 660407 - 663520 | 111832.0 |
| type i secretion outer membrane protein, tolc family | NCTC11190_00512 | Not Available | + | 663762 - 664934 | 42493.3 |
| octaprenyl-diphosphate synthase | NCTC11190_00513 | Not Available | - | 665024 - 666025 | 37186.6 |
| d-tyrosyl-trna(tyr) deacylase | NCTC11190_00514 | Not Available | - | 666035 - 666487 | 16035.2 |
| n-acetyl-beta-hexosaminidase | NCTC11190_00515 | Not Available | - | 666536 - 667537 | 36500.6 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | NCTC11190_00516 | Not Available | + | 667594 - 668325 | 27403.5 |
| farnesyl diphosphate synthase | NCTC11190_00517 | Not Available | + | 668382 - 669359 | 35538.1 |
| phosphomethylpyrimidine synthase | NCTC11190_00518 | Not Available | + | 669365 - 670909 | 57412.8 |
| 6-pyruvoyl tetrahydropterin synthase/qued family protein | NCTC11190_00519 | Not Available | + | 671394 - 671849 | 17264.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.