Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Rikenella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Rikenella |
| Species | Rikenella microfusus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rikenella microfusus
Accession NumberUGVL00000000.1
Gene Summary
Adenine Count
638140 bp
Thymine Count
632026 bp
Guanine Count
835063 bp
Cytosine Count
840640 bp
Genome Length
2945869 bp
Protein-coding Genes
2363 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| calcineurin-like phosphoesterase superfamily domain | NCTC11190_02027 | Not Available | + | 2412103 - 2413071 | 36657.5 |
| penicillin-binding protein e | NCTC11190_02028 | Not Available | + | 2413100 - 2414569 | 54931.0 |
| hydrolase of x-linked nucleoside diphosphate n terminal | NCTC11190_02029 | Not Available | - | 2415039 - 2415668 | 23613.9 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | NCTC11190_02030 | Not Available | - | 2415915 - 2417528 | 59152.7 |
| autoinducer 2-binding protein lsrb precursor | NCTC11190_02031 | Not Available | - | 2418129 - 2419061 | 31788.8 |
| alanine--trna ligase | NCTC11190_02032 | Not Available | - | 2419066 - 2421693 | 97365.1 |
| murein hydrolase activator nlpd precursor | NCTC11190_02033 | Not Available | + | 2422100 - 2423074 | 37171.7 |
| murein hydrolase activator nlpd precursor | NCTC11190_02034 | Not Available | + | 2423067 - 2424011 | 35940.8 |
| atp-dependent helicase/nuclease subunit a | NCTC11190_02035 | Not Available | - | 2424473 - 2427637 | 117686.0 |
| tonb-dependent receptor | NCTC11190_02036 | Not Available | + | 2427933 - 2430428 | 91813.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.