Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Rikenella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Rikenella |
| Species | Rikenella microfusus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rikenella microfusus
Accession NumberUGVL00000000.1
Gene Summary
Adenine Count
638140 bp
Thymine Count
632026 bp
Guanine Count
835063 bp
Cytosine Count
840640 bp
Genome Length
2945869 bp
Protein-coding Genes
2363 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| septum formation protein maf | NCTC11190_01454 | Not Available | - | 1744948 - 1745553 | 22334.8 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | NCTC11190_01455 | Not Available | - | 1745567 - 1746202 | 24128.2 |
| lipid-a-disaccharide synthase | NCTC11190_01456 | Not Available | - | 1746399 - 1747556 | 43586.8 |
| trna (guanine-n(1)-)-methyltransferase | NCTC11190_01457 | Not Available | - | 1747563 - 1748243 | 25649.7 |
| hydroxyacylglutathione hydrolase | NCTC11190_01458 | Not Available | - | 1748233 - 1748919 | 24907.8 |
| 23s rrna (uracil-c(5))-methyltransferase rlmcd | NCTC11190_01459 | Not Available | + | 1749004 - 1750413 | 53031.5 |
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmc | NCTC11190_01460 | Not Available | + | 1750434 - 1751090 | 24306.2 |
| cytidine deaminase | NCTC11190_01461 | Not Available | + | 1751102 - 1751506 | 14680.6 |
| maltose o-acetyltransferase | NCTC11190_01462 | Not Available | + | 1751593 - 1752153 | 20584.7 |
| trna pseudouridine synthase c | NCTC11190_01463 | Not Available | - | 1752150 - 1752863 | 27046.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.