Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Rikenella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Rikenella |
| Species | Rikenella microfusus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | intestine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rikenella microfusus
Accession NumberUGVL00000000.1
Gene Summary
Adenine Count
638140 bp
Thymine Count
632026 bp
Guanine Count
835063 bp
Cytosine Count
840640 bp
Genome Length
2945869 bp
Protein-coding Genes
2363 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipid a core - o-antigen ligase and related enzymes | NCTC11190_01173 | Not Available | + | 1425078 - 1426670 | 59460.4 |
| toxin relk | NCTC11190_01174 | Not Available | - | 1426637 - 1426951 | 12047.6 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | NCTC11190_01175 | Not Available | - | 1427543 - 1428301 | 27695.3 |
| nucleoside diphosphate kinase | NCTC11190_01176 | Not Available | - | 1428729 - 1429202 | 17567.9 |
| ribosomal large subunit pseudouridine synthase d | NCTC11190_01177 | Not Available | - | 1429454 - 1430539 | 40648.4 |
| pasta domain | NCTC11190_01178 | Not Available | - | 1430529 - 1431500 | 36289.6 |
| putative menaquinone biosynthesis protein, sco4494 family | NCTC11190_01179 | Not Available | - | 1431858 - 1432982 | 42361.8 |
| 50s ribosomal protein l34 | NCTC11190_01180 | Not Available | - | 1433066 - 1433221 | 6070.44 |
| elongation factor 4 | NCTC11190_01181 | Not Available | - | 1433391 - 1435178 | 66534.8 |
| protein of uncharacterised function (duf2807) | NCTC11190_01182 | Not Available | + | 1435751 - 1436641 | 30897.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.