Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas macacae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gingival crevicular fluid; oral cavity; subgingival plaque |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Porphyromonas macacae
Accession NumberUGTI00000000.1
Gene Summary
Adenine Count
652054 bp
Thymine Count
658537 bp
Guanine Count
511207 bp
Cytosine Count
507011 bp
Genome Length
2328809 bp
Protein-coding Genes
1939 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | NCTC13100_01655 | Not Available | + | 1928239 - 1928766 | 20037.2 |
| comec family competence protein | NCTC13100_01656 | Not Available | - | 1928756 - 1930327 | 59274.4 |
| ribulose-phosphate 3-epimerase | NCTC13100_01657 | Not Available | - | 1930363 - 1931031 | 25035.9 |
| uncharacterised protein | NCTC13100_01658 | Not Available | - | 1931108 - 1931236 | 5013.25 |
| rna polymerase sigma factor sigx | NCTC13100_01659 | Not Available | - | 1931465 - 1932055 | 22973.8 |
| trna modification gtpase mnme | NCTC13100_01660 | Not Available | - | 1932280 - 1933479 | 43331.8 |
| 2-iminoacetate synthase | NCTC13100_01661 | Not Available | - | 1933510 - 1934934 | 53452.2 |
| biotin synthase | NCTC13100_01662 | Not Available | - | 1935027 - 1936091 | 39677.8 |
| iron hydrogenase 1 | NCTC13100_01663 | Not Available | - | 1936075 - 1937520 | 53766.1 |
| cytidine deaminase | NCTC13100_01664 | Not Available | - | 1938057 - 1938539 | 17746.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
