Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas macacae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gingival crevicular fluid; oral cavity; subgingival plaque |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Porphyromonas macacae
Accession NumberUGTI00000000.1
Gene Summary
Adenine Count
652054 bp
Thymine Count
658537 bp
Guanine Count
511207 bp
Cytosine Count
507011 bp
Genome Length
2328809 bp
Protein-coding Genes
1939 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i restriction enzyme r protein n terminus (hsdr_n) | NCTC13100_01462 | Not Available | - | 1716161 - 1716628 | 18713.7 |
| amp nucleosidase | NCTC13100_01463 | Not Available | + | 1716676 - 1717452 | 28761.6 |
| dna polymerase iii subunit delta | NCTC13100_01464 | Not Available | + | 1717463 - 1718470 | 38375.5 |
| protein of uncharacterised function (duf3108) | NCTC13100_01465 | Not Available | + | 1718611 - 1719474 | 33472.4 |
| uncharacterized epimerase/dehydratase sav0553 | NCTC13100_01466 | Not Available | - | 1719585 - 1720541 | 35241.3 |
| transposase | NCTC13100_01467 | Not Available | - | 1721253 - 1722491 | 47907.2 |
| transposase and inactivated derivatives | NCTC13100_01468 | Not Available | - | 1722670 - 1722978 | 11818.2 |
| 5s ribosomal rna | Not Available | Not Available | + | 1723770 - 1723879 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 1724016 - 1726906 | Not Available |
| Trna-ala | Not Available | Not Available | + | 1727059 - 1727135 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
