Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate transporter subunit | A6U92_20875 | P16700 | - | 5460641 - 5461627 | 36363.7 |
| 3-hydroxyisobutyryl-coa hydrolase | A6U92_20880 | Q5XIE6 | - | 5461775 - 5462845 | 38601.7 |
| hypothetical protein | A6U92_20885 | Not Available | + | 5463133 - 5463369 | 8895.53 |
| saccharopine dehydrogenase | A6U92_20890 | P0DPE4 | - | 5463443 - 5464681 | 45331.3 |
| carboxynorspermidine decarboxylase | A6U92_20895 | Q5QCP2 | - | 5464730 - 5465827 | 41185.9 |
| hypothetical protein | A6U92_20900 | Not Available | + | 5466053 - 5466394 | 11817.0 |
| hypothetical protein | A6U92_20905 | Not Available | + | 5466404 - 5466823 | 14677.8 |
| udp-glucose 4-epimerase gale | A6U92_20910 | P26503 | + | 5466952 - 5467935 | 36520.0 |
| photosystem reaction center subunit h | A6U92_20915 | Not Available | - | 5468046 - 5468597 | 17996.3 |
| histidine kinase | A6U92_20920 | Not Available | + | 5468823 - 5470562 | 64017.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
