Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6U92_00390 | P0AAR6 | - | 76794 - 77150 | 13066.5 |
| lactoylglutathione lyase | A6U92_00395 | Q55595 | + | 77338 - 77733 | 14845.7 |
| uracil-dna glycosylase | A6U92_00400 | Q8UCM8 | + | 77749 - 78441 | 25549.5 |
| iron-chelator utilization protein | A6U92_00405 | A5F660 | + | 78524 - 79591 | 38948.3 |
| dioxygenase | A6U92_00410 | P96693 | + | 79752 - 80684 | 34217.2 |
| esterase | A6U92_00415 | Not Available | + | 80749 - 81360 | 22223.5 |
| hypothetical protein | A6U92_00420 | Not Available | - | 81419 - 82003 | 22149.2 |
| rna methyltransferase | A6U92_00425 | Not Available | - | 82105 - 82950 | 29924.0 |
| hypothetical protein | A6U92_00430 | Not Available | - | 82940 - 83320 | 13437.3 |
| rna pseudouridine synthase | A6U92_00435 | P50513 | + | 83360 - 84382 | 37576.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
