Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | A6U92_04115 | Q9R9N5 | + | 846039 - 847085 | 38030.2 |
| pyruvate dehydrogenase complex e1 component subunit beta | A6U92_04120 | Q9R9N4 | + | 847104 - 848531 | 50786.1 |
| hypothetical protein | A6U92_04125 | Not Available | + | 848528 - 848830 | 11013.9 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | A6U92_04130 | Q9R9N3 | + | 848833 - 850224 | 47912.4 |
| arylesterase | A6U92_04135 | Not Available | + | 850284 - 850928 | 23210.8 |
| dihydrolipoyl dehydrogenase | A6U92_04140 | O05940 | + | 850991 - 852436 | 51497.0 |
| hypothetical protein | A6U92_04145 | Not Available | + | 852492 - 852746 | 8405.84 |
| hypothetical protein | A6U92_04150 | Not Available | + | 852762 - 853010 | 8880.34 |
| lipoyl synthase | A6U92_04155 | Q8UFG1 | + | 853041 - 854012 | 36503.9 |
| multidrug dmt transporter permease | A6U92_04160 | P39314 | - | 854259 - 855191 | 33035.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
