Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| malic enzyme | A6U92_03870 | O30807 | - | 786234 - 788549 | 83191.4 |
| udp-2,3-diacylglucosamine hydrolase | A6U92_03875 | Not Available | + | 788766 - 789596 | 31405.5 |
| dipeptide epimerase | A6U92_03880 | P51981 | - | 789612 - 790595 | 34931.1 |
| organic solvent abc transporter permease | A6U92_03885 | Q4UNC7 | + | 790739 - 791899 | 40788.2 |
| abc transporter atp-binding protein | A6U92_03890 | P45031 | + | 791909 - 792745 | 30298.6 |
| organic solvent abc transporter substrate-binding protein | A6U92_03895 | Not Available | + | 792748 - 794118 | 48576.1 |
| abc transporter | A6U92_03900 | P29285 | + | 794147 - 794752 | 21601.9 |
| hypothetical protein | A6U92_03905 | Q87QJ4 | - | 794816 - 795253 | 16307.3 |
| 5s ribosomal rna | Not Available | Not Available | + | 799075 - 799189 | Not Available |
| hypothetical protein | A6U92_03910 | Not Available | - | 795430 - 802188 | 240745.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
