Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6U92_00240 | Not Available | + | 50550 - 51620 | 37128.0 |
| hypothetical protein | A6U92_00245 | Not Available | + | 51993 - 53180 | 44859.2 |
| trna 2-thiouridine(34) synthase mnma | A6U92_00250 | Q8U9M5 | + | 53359 - 54555 | 43355.6 |
| Trna-met | Not Available | Not Available | + | 54690 - 54766 | Not Available |
| hypothetical protein | A6U92_00260 | Not Available | - | 54947 - 55558 | 20459.6 |
| hypothetical protein | A6U92_00265 | Not Available | - | 55584 - 55901 | 10600.6 |
| ku protein | A6U92_00270 | B8EKE1 | + | 56075 - 56866 | 29627.8 |
| dna ligase | A6U92_00275 | Q9I1X7 | - | 56874 - 59354 | 92256.3 |
| ku protein | A6U92_00280 | A8HV31 | - | 59357 - 60196 | 31398.2 |
| hypothetical protein | A6U92_00285 | Not Available | - | 60193 - 60459 | 9880.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
