Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartyl/glutamyl-trna amidotransferase subunit b | A6U92_03775 | B9JVJ7 | + | 770188 - 771690 | 54833.3 |
| gcn5 family acetyltransferase | A6U92_03780 | Not Available | + | 771902 - 772399 | 18420.3 |
| acetyltransferase | A6U92_03785 | Not Available | + | 772396 - 772869 | 17318.9 |
| nadh dehydrogenase | A6U92_03790 | Not Available | + | 772980 - 773378 | 15117.6 |
| glycosyl hydrolase family 5 | A6U92_03795 | Not Available | + | 773525 - 773962 | 15794.8 |
| leucyl/phenylalanyl-trna--protein transferase | A6U92_03800 | Q8UFR8 | - | 773972 - 774583 | 22920.3 |
| acetyl-coa carboxylase biotin carboxylase subunit | A6U92_03805 | P43873 | - | 774587 - 775930 | 48906.7 |
| acetyl-coa carboxylase, biotin carboxyl carrier protein | A6U92_03810 | P43874 | - | 775942 - 776430 | 16766.0 |
| type ii 3-dehydroquinate dehydratase | A6U92_03815 | Q8UFR5 | - | 776459 - 776896 | 15506.8 |
| disulfide bond formation protein dsba | A6U92_03820 | Not Available | - | 777022 - 777789 | 27877.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
