Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tol-pal system beta propeller repeat protein tolb | A6U92_00190 | Q8U9L4 | + | 35779 - 37092 | 48247.2 |
| peptidoglycan-associated lipoprotein | A6U92_00195 | Q8U9L5 | + | 37304 - 37837 | 18805.3 |
| tol-pal system protein ybgf | A6U92_00200 | Not Available | + | 37993 - 39003 | 35460.8 |
| trna lysidine(34) synthetase tils | A6U92_00205 | Q8U9L7 | + | 39027 - 40349 | 47242.8 |
| cell division protein ftsh | A6U92_00210 | A1URA3 | + | 40504 - 42450 | 70468.5 |
| phosphoglucosamine mutase | A6U92_00215 | Q8U9L9 | + | 42664 - 44016 | 48571.4 |
| histidine kinase | A6U92_00220 | Not Available | - | 44072 - 46042 | 72479.4 |
| hypothetical protein | A6U92_00225 | Q579D9 | + | 46476 - 47282 | 28788.8 |
| phosphoserine aminotransferase | A6U92_00230 | Q8TNI1 | + | 47494 - 48672 | 42464.1 |
| phosphoglycerate dehydrogenase | A6U92_00235 | P73821 | + | 48751 - 50346 | 56434.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
