Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | A6U92_03315 | Q2YNM1 | + | 672207 - 672563 | 12968.9 |
| protein translocase subunit secdf | A6U92_03320 | Q2YNM0 | + | 672646 - 675213 | 92831.4 |
| hypothetical protein | A6U92_03325 | Not Available | + | 675213 - 675605 | 13689.5 |
| phytoene synthase | A6U92_03330 | Not Available | + | 675632 - 676468 | 30558.7 |
| methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfo | A6U92_03340 | Q8UET6 | - | 677016 - 678488 | 52767.1 |
| hypothetical protein | A6U92_03345 | Not Available | - | 678800 - 679012 | 7491.84 |
| hypothetical protein | A6U92_03350 | Not Available | - | 679249 - 679494 | 9020.49 |
| Trna-lys | Not Available | Not Available | + | 679628 - 679703 | Not Available |
| hypothetical protein | A6U92_03360 | Not Available | - | 679865 - 680116 | 8625.08 |
| dimethylglycine dehydrogenase | A6U92_03370 | Q9DBT9 | + | 683016 - 685529 | 92195.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
