Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | A6U92_03015 | Q8UEL0 | + | 617950 - 618309 | 13496.1 |
| threonine--trna ligase | A6U92_03020 | Q8UEL1 | + | 618427 - 620439 | 75836.1 |
| copg family transcriptional regulator | A6U92_03025 | Not Available | + | 620568 - 620828 | 9634.49 |
| hypothetical protein | A6U92_03030 | Not Available | + | 620828 - 621139 | 11742.2 |
| hypothetical protein | A6U92_03035 | Not Available | - | 621152 - 622132 | 34515.8 |
| nitroreductase | A6U92_03040 | Not Available | + | 622242 - 622823 | 21501.8 |
| flavin reductase | A6U92_03045 | Not Available | + | 622823 - 623425 | 21841.0 |
| hypothetical protein | A6U92_03050 | Not Available | + | 623562 - 624713 | 41587.2 |
| hypothetical protein | A6U92_03055 | Not Available | - | 624717 - 625130 | 15107.0 |
| gcn5 family acetyltransferase | A6U92_03060 | P26945 | + | 625246 - 625701 | 16577.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
