Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional adp-dependent (s)-nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | A6U92_02915 | B5YIM0 | + | 599755 - 601230 | 51338.4 |
| arac family transcriptional regulator | A6U92_02920 | A0A0H2ZIC3 | - | 601227 - 602267 | 38650.4 |
| hypothetical protein | A6U92_02925 | Not Available | + | 602665 - 603093 | 15443.8 |
| glycogen debranching enzyme glgx | A6U92_02930 | P0A4Y5 | - | 603151 - 605226 | 77662.8 |
| hypothetical protein | A6U92_02935 | Not Available | - | 605351 - 605566 | 8379.23 |
| lysr family transcriptional regulator | A6U92_02940 | P16931 | + | 605797 - 606693 | 32993.2 |
| entericidin | A6U92_02945 | Not Available | + | 606808 - 606969 | 5379.43 |
| hypothetical protein | A6U92_02950 | Not Available | + | 607155 - 607907 | 27519.7 |
| hypothetical protein | A6U92_02955 | Not Available | - | 607918 - 608271 | 13016.4 |
| l-serine ammonia-lyase | A6U92_02960 | O86564 | + | 608923 - 610326 | 49508.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
