Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter permease | A6U92_20825 | P0AFK4 | - | 5449138 - 5449965 | 29715.6 |
| abc transporter substrate-binding protein | A6U92_20830 | Not Available | - | 5450239 - 5451261 | 37104.5 |
| laci family transcriptional regulator | A6U92_20835 | P44329 | - | 5451258 - 5452325 | 36901.1 |
| lysr family transcriptional regulator | A6U92_20840 | Not Available | - | 5452443 - 5453357 | 32888.9 |
| acyl-coa dehydrogenase | A6U92_20845 | Q92947 | + | 5453454 - 5454641 | 43661.4 |
| nad-dependent succinate-semialdehyde dehydrogenase | A6U92_20850 | Q1JUP4 | + | 5454927 - 5456363 | 51445.8 |
| hypothetical protein | A6U92_20855 | Not Available | - | 5456554 - 5457486 | 34716.1 |
| sulfate abc transporter atp-binding protein | A6U92_20860 | Q8UA73 | - | 5457838 - 5458863 | 37774.3 |
| sulfate abc transporter permease subunit cysw | A6U92_20865 | P0AEB1 | - | 5458860 - 5459741 | 31122.7 |
| sulfate abc transporter permease subunit cyst | A6U92_20870 | P41032 | - | 5459745 - 5460566 | 29309.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
