Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6U92_20125 | P0AB08 | - | 5292161 - 5294059 | 66304.7 |
| sigma-54-dependent fis family transcriptional regulator | A6U92_20130 | P25852 | - | 5294266 - 5295822 | 56604.1 |
| oligoendopeptidase f | A6U92_20135 | Not Available | + | 5295993 - 5297837 | 68496.0 |
| hypothetical protein | A6U92_20140 | Not Available | + | 5297923 - 5298558 | 23285.0 |
| diguanylate cyclase | A6U92_20145 | Q9A5I5 | - | 5298802 - 5299704 | 34140.8 |
| homospermidine synthase | A6U92_20150 | Q98H64 | + | 5299949 - 5301397 | 54118.3 |
| hypothetical protein | A6U92_20155 | Q8U9F9 | + | 5301554 - 5301925 | 12921.3 |
| multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase | A6U92_20160 | B6EWW8 | + | 5302132 - 5304081 | 68383.9 |
| ferrochelatase | A6U92_20165 | Q8U9F7 | + | 5304567 - 5305616 | 39971.9 |
| hypothetical protein | A6U92_20170 | P0AA55 | + | 5305662 - 5306726 | 38335.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
