Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit i | A6U92_19720 | P24010 | - | 5201547 - 5204051 | 91851.5 |
| cytochrome c oxidase subunit ii | A6U92_19725 | Q04441 | - | 5204051 - 5204692 | 23338.7 |
| hypothetical protein | A6U92_19730 | Not Available | + | 5204774 - 5205271 | 17155.0 |
| hypothetical protein | A6U92_19735 | Not Available | - | 5205249 - 5205746 | 18331.2 |
| hypothetical protein | A6U92_19740 | Not Available | - | 5205752 - 5206489 | 26990.4 |
| formate dehydrogenase | A6U92_19745 | Q83RF3 | + | 5206848 - 5209097 | 82640.4 |
| hypothetical protein | A6U92_19750 | P0AC25 | + | 5209094 - 5209894 | 26872.1 |
| mate family efflux transporter | A6U92_19755 | Not Available | - | 5209948 - 5211285 | 48097.5 |
| alkylhydroperoxidase | A6U92_19760 | Not Available | - | 5211286 - 5211864 | 21395.4 |
| cmd domain protein | A6U92_19765 | Not Available | - | 5211866 - 5212366 | 18340.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
