Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6U92_18770 | Not Available | - | 4996397 - 4996684 | 10760.7 |
| glycosyl transferase | A6U92_18775 | Q59002 | - | 4996677 - 4997834 | 41711.8 |
| hypothetical protein | A6U92_18780 | Q55946 | - | 4997831 - 4998817 | 33963.6 |
| histone acetyltransferase | A6U92_18785 | Not Available | - | 4998820 - 4999362 | 20199.2 |
| radical sam protein | A6U92_18790 | Not Available | - | 4999359 - 5000477 | 39984.4 |
| aliphatic nitrilase | A6U92_18795 | Q6RWG0 | - | 5000404 - 5001447 | 37983.5 |
| hypothetical protein | A6U92_18800 | Not Available | - | 5001535 - 5002017 | 17484.2 |
| hypothetical protein | A6U92_18805 | Not Available | + | 5002004 - 5002264 | 9518.63 |
| gntr family transcriptional regulator | A6U92_18810 | Q01856 | + | 5002355 - 5003758 | 50424.2 |
| ribosome small subunit-dependent gtpase a | A6U92_18815 | Q98JM4 | - | 5003803 - 5004867 | 38291.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
