Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit a | A6U92_18450 | O68852 | - | 4929395 - 4929760 | 13756.1 |
| Trna-asp | Not Available | Not Available | + | 4930242 - 4930318 | Not Available |
| Trna-asp | Not Available | Not Available | + | 4930362 - 4930438 | Not Available |
| Trna-val | Not Available | Not Available | + | 4930889 - 4930964 | Not Available |
| nad-dependent dehydratase | A6U92_18470 | Q7CRQ0 | - | 4931166 - 4931966 | 28861.1 |
| 5-dehydro-4-deoxyglucarate dehydratase | A6U92_18475 | Q11GY5 | + | 4932255 - 4933160 | 32114.5 |
| mandelate racemase | A6U92_18480 | A9CEQ8 | + | 4933157 - 4934290 | 40984.0 |
| acetyltransferase | A6U92_18485 | Not Available | - | 4934345 - 4934782 | 16486.5 |
| riboflavin deaminase | A6U92_18490 | Not Available | - | 4934811 - 4935449 | 23211.7 |
| alkaline phosphatase | A6U92_18495 | Not Available | - | 4935623 - 4937821 | 77897.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
