Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | A6U92_17635 | Not Available | - | 4758449 - 4759234 | 27864.5 |
| gntr family transcriptional regulator | A6U92_17640 | Not Available | - | 4759246 - 4759953 | 26380.8 |
| lipid-a-disaccharide synthase | A6U92_17645 | Q3SRI5 | - | 4760092 - 4761288 | 43792.4 |
| hypothetical protein | A6U92_17650 | Q9A716 | - | 4761285 - 4762151 | 30150.6 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | A6U92_17655 | C3MBR2 | - | 4762155 - 4762967 | 28534.3 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | A6U92_17660 | Q8UFL4 | - | 4762964 - 4763431 | 17186.9 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | A6U92_17665 | Q8UFL5 | - | 4763424 - 4764488 | 36793.6 |
| outer membrane protein assembly factor bama | A6U92_17670 | C6V5K2 | - | 4764538 - 4766880 | 84880.8 |
| rip metalloprotease rsep | A6U92_17675 | Q8UFL7 | - | 4767082 - 4768215 | 40361.4 |
| phosphatidate cytidylyltransferase | A6U92_17680 | Q2YRP9 | - | 4768252 - 4769085 | 29305.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
