Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6U92_17370 | Not Available | + | 4702399 - 4702743 | 13120.0 |
| hypothetical protein | A6U92_17375 | Not Available | + | 4702950 - 4703405 | 17314.5 |
| hypothetical protein | A6U92_17380 | Not Available | - | 4703563 - 4703823 | 9196.55 |
| chloride channel protein | A6U92_17400 | Q8GX93 | - | 4708092 - 4709873 | 62924.8 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | A6U92_17405 | Q7MUY1 | - | 4709905 - 4710732 | 30523.3 |
| luxr family transcriptional regulator | A6U92_17410 | P37545 | - | 4710736 - 4711518 | 28780.2 |
| methionine--trna ligase | A6U92_17415 | Q8UFA2 | - | 4711524 - 4713074 | 57827.5 |
| dna polymerase iii subunit delta' | A6U92_17420 | P52024 | - | 4713173 - 4714198 | 37063.7 |
| dtmp kinase | A6U92_17425 | Q8UFA0 | - | 4714195 - 4714866 | 24497.2 |
| hypothetical protein | A6U92_17430 | Not Available | + | 4715199 - 4716413 | 42742.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
