Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6U92_02000 | Not Available | + | 415841 - 416395 | 19694.9 |
| cell division protein | A6U92_02005 | B8H0A0 | + | 416395 - 418134 | 62707.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | A6U92_02010 | Q8UDM3 | + | 418193 - 419653 | 51300.3 |
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligase | A6U92_02015 | Q92H60 | + | 419650 - 421083 | 50595.0 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | A6U92_02020 | Q8UDM5 | + | 421204 - 422304 | 39184.1 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | A6U92_02025 | Q8UDM6 | + | 422309 - 423718 | 48891.1 |
| cell division protein ftsw | A6U92_02030 | B8H092 | + | 423723 - 424877 | 42533.4 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | A6U92_02035 | Q8UDM8 | + | 424882 - 426021 | 39044.9 |
| udp-n-acetylmuramate--l-alanine ligase | A6U92_02040 | Q8UDM9 | + | 426018 - 427433 | 50677.6 |
| udp-n-acetylenolpyruvoylglucosamine reductase | A6U92_02045 | Q8UDN0 | + | 427430 - 428395 | 35034.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
