Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fe3+/spermidine/putrescine abc transporter atp-binding protein | A6U92_17045 | Q60AI1 | - | 4626589 - 4627707 | 40869.2 |
| abc transporter permease | A6U92_17050 | Not Available | - | 4627727 - 4628545 | 29817.0 |
| abc transporter permease | A6U92_17055 | Not Available | - | 4628551 - 4629408 | 31522.0 |
| abc transporter substrate-binding protein | A6U92_17060 | Not Available | - | 4629461 - 4630750 | 46865.5 |
| succinate-semialdehyde dehydrogenase (nadp(+)) | A6U92_17065 | Q9I6M5 | - | 4631262 - 4632737 | 52535.9 |
| glutamyl-trna amidotransferase | A6U92_17070 | A0L5G0 | - | 4632781 - 4634214 | 50976.9 |
| methylhydantoinase | A6U92_17075 | Q01263 | - | 4634563 - 4636332 | 64421.4 |
| methylhydantoinase | A6U92_17080 | Not Available | - | 4636344 - 4638425 | 74248.3 |
| oxidoreductase | A6U92_17085 | Q9X248 | - | 4638616 - 4639383 | 26781.3 |
| hypothetical protein | A6U92_17090 | Not Available | + | 4639915 - 4640814 | 32350.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
