Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyrophosphate--fructose-6-phosphate 1-phosphotransferase | A6U92_01950 | Q3KSV5 | - | 405574 - 406785 | 43015.3 |
| hypothetical protein | A6U92_01955 | Not Available | + | 407184 - 408173 | 37812.4 |
| molecular chaperone djla | A6U92_01960 | Q74Q30 | + | 408380 - 409120 | 27441.9 |
| n-acetylmuramoyl-l-alanine amidase | A6U92_01965 | P44624 | + | 409117 - 409884 | 27657.8 |
| lytic transglycosylase | A6U92_01970 | Not Available | + | 410129 - 410665 | 19237.6 |
| fad-dependent oxidoreductase | A6U92_01975 | Not Available | + | 410786 - 411973 | 42164.1 |
| fad-dependent oxidoreductase | A6U92_01980 | Not Available | + | 412306 - 413499 | 42574.4 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 413559 - 413960 | Not Available |
| cell division/cell wall cluster transcriptional repressor mraz | A6U92_01990 | P58768 | + | 414359 - 414799 | 16142.3 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | A6U92_01995 | P58745 | + | 414814 - 415839 | 36278.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
