Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | A6U92_01900 | Not Available | - | 395517 - 395981 | 17358.8 |
| redox-sensitive transcriptional activator soxr | A6U92_01905 | Q51506 | + | 396083 - 396523 | 15985.4 |
| arsr family transcriptional regulator | A6U92_01910 | O31474 | + | 396676 - 397689 | 37254.8 |
| methylenetetrahydrofolate reductase | A6U92_01915 | P71319 | + | 397691 - 398587 | 33067.2 |
| lytic transglycosylase | A6U92_01920 | Not Available | - | 399018 - 400244 | 43894.2 |
| glycoside hydrolase | A6U92_01925 | P25310 | - | 400411 - 401202 | 30082.3 |
| methyltransferase | A6U92_01930 | Not Available | - | 401378 - 402055 | 25398.7 |
| s-adenosylmethionine--diacylglycerol 3-amino-3-carboxypropyl transferase | A6U92_01935 | Not Available | - | 402052 - 403302 | 47250.5 |
| lytic transglycosylase | A6U92_01940 | Not Available | - | 403606 - 404643 | 35533.4 |
| lysine transporter lyse | A6U92_01945 | Not Available | - | 404767 - 405402 | 22871.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
