Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gtpase obge | A6U92_14685 | Q7CW97 | + | 4116045 - 4117112 | 38208.7 |
| glutamate 5-kinase | A6U92_14690 | Q8UBS0 | + | 4117109 - 4118290 | 41188.6 |
| glutamate-5-semialdehyde dehydrogenase | A6U92_14695 | Q8UBS1 | + | 4118283 - 4119569 | 44714.7 |
| nicotinic acid mononucleotide adenylyltransferase | A6U92_14700 | Q8UBS2 | + | 4119612 - 4120196 | 21838.4 |
| ribosome silencing factor | A6U92_14705 | Q5NLX3 | + | 4120318 - 4120731 | 15060.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | A6U92_14710 | Q8UBS4 | + | 4120834 - 4121316 | 17531.2 |
| hypothetical protein | A6U92_14715 | Not Available | + | 4121441 - 4122856 | 50984.4 |
| peptidase s41 | A6U92_14720 | Q44879 | + | 4122846 - 4124174 | 47229.5 |
| hypothetical protein | A6U92_14725 | Not Available | + | 4124241 - 4125443 | 42345.2 |
| rna pyrophosphohydrolase | A6U92_14730 | Q8UBS8 | + | 4125531 - 4125995 | 17557.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
