Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6U92_01750 | Not Available | + | 361314 - 362531 | 43885.8 |
| hypothetical protein | A6U92_01755 | Not Available | + | 362782 - 363054 | 9479.79 |
| alcohol dehydrogenase | A6U92_01760 | P42328 | - | 363330 - 364373 | 37485.0 |
| spermidine/putrescine abc transporter atp-binding protein | A6U92_01765 | Q6D734 | - | 364430 - 365488 | 38161.0 |
| spermidine/putrescine abc transporter permease | A6U92_01770 | Not Available | - | 365500 - 366282 | 28554.9 |
| acriflavin resistance protein | A6U92_01775 | Not Available | - | 366279 - 367169 | 31960.2 |
| iron abc transporter substrate-binding protein | A6U92_01780 | Not Available | - | 367263 - 368369 | 39054.5 |
| rpir family transcriptional regulator | A6U92_01785 | P44540 | - | 368579 - 369463 | 32850.9 |
| n-formylglutamate amidohydrolase | A6U92_01790 | Not Available | + | 369641 - 370402 | 27837.0 |
| amino acid abc transporter permease | A6U92_01795 | Not Available | + | 370595 - 372109 | 54102.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
