Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | A6U92_01695 | Not Available | - | 348126 - 350678 | 93773.7 |
| hypothetical protein | A6U92_01705 | Not Available | + | 351534 - 351872 | 12182.7 |
| hypothetical protein | A6U92_01710 | P0A3U8 | - | 351990 - 352727 | 25927.1 |
| Trna-met | Not Available | Not Available | + | 352914 - 352989 | Not Available |
| phosphotyrosine protein phosphatase | A6U92_01720 | Not Available | - | 353012 - 353332 | 12205.8 |
| hypothetical protein | A6U92_01725 | Not Available | + | 353505 - 354572 | 37619.5 |
| hypothetical protein | A6U92_01730 | Not Available | + | 354765 - 355217 | 17013.4 |
| tyrosine protein phosphatase | A6U92_01735 | Not Available | + | 355453 - 356013 | 20604.5 |
| mannose-6-phosphate isomerase | A6U92_01740 | A0A0P9JFY5 | - | 356089 - 357336 | 47428.8 |
| methionine synthase | A6U92_01745 | Q9I2Q2 | + | 357529 - 361302 | 138697.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
