Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate phosphodiesterase | A6U92_01495 | Not Available | - | 303674 - 304576 | 33620.4 |
| aspartate aminotransferase | A6U92_01500 | O86459 | + | 304785 - 305987 | 43560.3 |
| calcium:proton antiporter | A6U92_01505 | P55471 | - | 306038 - 307153 | 39676.4 |
| hypothetical protein | A6U92_01510 | Not Available | + | 307339 - 307611 | 10084.2 |
| hypothetical protein | A6U92_01515 | Not Available | + | 307715 - 308596 | 32955.9 |
| alkene reductase | A6U92_01520 | P77258 | - | 308711 - 309823 | 39398.2 |
| transcriptional regulator | A6U92_01525 | Not Available | - | 309871 - 310161 | 11037.2 |
| lysr family transcriptional regulator | A6U92_01530 | P37641 | - | 310752 - 311648 | 33766.6 |
| thioredoxin-disulfide reductase | A6U92_01535 | Q92I02 | - | 311672 - 312646 | 34755.6 |
| arsr family transcriptional regulator | A6U92_01540 | P56901 | + | 312891 - 313358 | 17281.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
