Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase | A6U92_00890 | Not Available | + | 179175 - 179465 | 10463.6 |
| hypothetical protein | A6U92_00895 | Not Available | + | 179462 - 179824 | 13782.7 |
| ureidoglycolate hydrolase | A6U92_00900 | B3PW72 | + | 179828 - 180328 | 18591.1 |
| hydroxyisourate hydrolase | A6U92_00905 | Q92UG5 | + | 180325 - 180681 | 12947.3 |
| yfce family phosphodiesterase | A6U92_00910 | Not Available | + | 180687 - 181427 | 26796.0 |
| peptidase m15 | A6U92_00915 | P0AEB4 | - | 181435 - 182676 | 44534.6 |
| tetr family transcriptional regulator | A6U92_00920 | Not Available | + | 182864 - 183448 | 21510.7 |
| quaternary ammonium transporter | A6U92_00925 | Q9X2N9 | + | 183460 - 183789 | 11642.7 |
| alpha-hydroxy-acid oxidizing enzyme | A6U92_00930 | A4XYG7 | - | 183804 - 184940 | 41525.4 |
| chemotaxis protein | A6U92_00935 | Not Available | - | 185811 - 187769 | 69211.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
