Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium rubi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium rubi
Accession NumberLXKU00000000.1
Gene Summary
Adenine Count
1183097 bp
Thymine Count
1172902 bp
Guanine Count
1576030 bp
Cytosine Count
1577043 bp
Genome Length
5510033 bp
Protein-coding Genes
5005 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| esterase | A6U92_00740 | Not Available | + | 142118 - 143122 | 35322.0 |
| c factor | A6U92_00745 | Not Available | - | 143138 - 143854 | 25131.1 |
| Trna-arg | Not Available | Not Available | + | 143928 - 144004 | Not Available |
| marr family transcriptional regulator | A6U92_00755 | O33817 | + | 144566 - 144973 | 15353.7 |
| abc transporter atp-binding protein | A6U92_00760 | Not Available | - | 145076 - 145858 | 27993.9 |
| sugar abc transporter permease | A6U92_00765 | Not Available | - | 145879 - 147192 | 45925.4 |
| d-xylose abc transporter substrate-binding protein | A6U92_00770 | P37387 | - | 147333 - 148373 | 36356.3 |
| transcriptional regulator | A6U92_00775 | Not Available | + | 148601 - 149821 | 43343.3 |
| hypothetical protein | A6U92_00780 | Not Available | + | 149851 - 150081 | 8439.35 |
| hypothetical protein | A6U92_00785 | Not Available | - | 150082 - 150537 | 17162.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
